species:   Artha
pid:       MI0013369
parent:    ath-MIR2939
paralog:   
locus:     5:19566960-19567084
matures:   ['UAACGCACAACACUAAGCCAU', 'GACUUAUUGUUGUGUUACC']
srr:       SRR9216050
genome:    /Users/jax/+Genomes/Plant_genomes/Artha.TAIR10_chr_all.fa
alignment: /media/data/njohnson/+SeqLibraries/FunHP_libraries/Artha.SRR9216050.cram
call:      samtools view /media/data/njohnson/+SeqLibraries/FunHP_libraries/Artha.SRR9216050.cram 5:19566960-19567084

0 out of bounds
1 alignments
1 proper strand
1 stranded perfect matches

                          *********************                             ***********************                          
GUUGUCACCGUUAGUCUUUCACUACGAUGACUUAUUGUUGUGUUACCAAAGAAAACAUAAGGCUUGUGUUGUCUUUGGUAACGCACAACACUAAGCCAUCGCAGUUACAGACAACAAAAUGGCAC
..(((((..(((.((((...(((.(((((.((((.(((((((((((((((((.(((((((...))))))).)))))))))..)))))))).)))).))))).)))...)))))))....))))).
------------------------------------------------------------------------------UAACGCACAACACUAAGCCAU-------------------------- l=21 a=0 c
----------------------------GACUUAUUGUUGUGUUACC------------------------------------------------------------------------------ l=19 a=0 c*
----------------------------------------------------------AAGGCUUGUGUUGUCUUUGGUA--------------------------------------------- l=22 a=1 ma
----------------------------GACUUAUUGUUGUGUUACC------------------------------------------------------------------------------ l=19 a=0 ma*

----------------------------------------------------------AAGGCUUGUGUUGUCUUUGGUA--------------------------------------------- l=22 a=1 (ma)

mb-00011
ax-1011111
ku-01
ss-110111111110
fn-011
